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Items where Author is "Sattar, A."

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Number of items: 15.

Journal Article

Dehzangi, Abdollah and Lopez, Y. and Lal, Sunil and Taherzadeh, G. and Sattar, A. and Tsunoda, T. and Sharma, Alokanand (2018) Improving succinylation prediction accuracy by incorporating the secondary structure via helix, strand and coil, and evolutionary infomration from profile bigrams. PLoS One, 13 (2). pp. 1-16. ISSN 1932-6203

López, Y. and Sharma, Alokanand and Dehzangi, Abdollah and Lal, Sunil P. and Taherzadeh, G. and Sattar, A. and Tsunoda, T. (2018) Success: evolutionary and structural properties of amino acids prove effective for succinylation site prediction. BMC Genomics, 19 . pp. 105-114. ISSN 1471-2164

Dehzangi, A. and López, Y. and Lal, S.P. and Taherzadeh, G. and Mchaelson, J. and Sattar, A. and Tsunoda, T. and Sharma, Alokanand (2017) PSSM - Suc: accurately predicting succinylation using position specific scoring matrix into bigram for feature extraction. Journal of Theoretical Biology, 425 . pp. 97-102. ISSN 0022-5193

López, Y. and Dehzangi, A. and Lal, S.P. and Taherzadeh, G. and Michaelson, J. and Sattar, A. and Tsunoda, T. and Sharma, Alokanand (2017) SucStruct: prediction of succinylated lysine residues by using structural properties of amino acids. Analytical Biochemistry, 527 . pp. 24-32. ISSN ‎0003-2697

Heffernan, R. and Dehzangi, Abdollah and Lyons, J. and Paliwal, K.K. and Sharma, Alokanand and Wang, J. and Sattar, A. and Zhou, Y. and Yang, Y. (2016) Highly Accurate Sequence-based Prediction of Half-Sphere Exposures of Amino Acid Residues in Proteins. Bioinformatics, 32 (6). pp. 843-849. ISSN 1367-4803

Rashid, Mahmood and Khatib, F. and Hoque, T. and Sattar, A. (2015) An enhanced genetic algorithm for Ab initio protein structure prediction. IEEE Transactions on Evolutionary Computation, PP (99). NA-NA. ISSN 1089-778X

Dehzangi, A. and Sohrabi, S. and Heffernan, R. and Sharma, Alokanand and Lyons, J. and Paliwal, K.K. and Sattar, A. (2015) Gram - positive and gram - negative subcellular localization using rotation forest and physicochemical-based features. BMC Bioinformatics, 16 (S1). pp. 1-12. ISSN 1471-2105

Dehzangi, A. and Heffernan, R. and Sharma, Alokanand and Lyons, J. and Paliwal, K.K. and Sattar, A. (2015) Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳ s general PseAAC. Journal of Theoretical Biology, 364 . pp. 284-294. ISSN 0022-5193

Heffernan, R. and Dehzangi, A. and Lyons, J. and Paliwal, K.K. and Sharma, Alokanand and Wang, J. and Sattar, A. and Zhou, Y. and Yang, Y. (2015) Highly accurate sequence - based prediction of half - sphere exposures of amino acid residues in proteins. Bioinformatics, 14 . pp. 1-7. ISSN 1367-4803

Heffernan, R. and Paliwal, K.K. and Lyons, J. and Dehzangi, A. and Sharma, Alokanand and Wang, J. and Sattar, A. and Yang, Y. and Zhou, Y. (2015) Improving prediction of secondary structure, local backbone angles, and solvent accessible surface area of proteins by iterative deep learning. Scientific Reports, 5 (11476). pp. 1-11. ISSN NA

Dehzangi, A. and Sharma, Alokanand and Lyons, J. and Paliwal, K.K. and Sattar, A. (2015) A mixture of physicochemical and evolutionary–based feature extraction approaches for protein fold recognition. International Journal of Data Mining and Bioinformatics, 11 (1). pp. 115-138. ISSN 1748-5673

Dehzangi, A. and Paliwal, K.K. and Lyons, J. and Sharma, Alokanand and Sattar, A. (2014) A segmentation - based method to extract structural and evolutionary features for protein fold recognition. IEEE-ACM Transactions on Computational Biology and Bioinformatics, PP (99). pp. 1-11. ISSN 1557-9964

Lyons, S. and Dehzangi, A. and Heffernan, R. and Sharma, Alokanand and Paliwal, K.K. and Sattar, A. and Zhou, Y. and Yang, Y. (2014) Predicting backbone Cα angles and dihedrals from protein sequences by stacked sparse auto-encoder deep neural network. Journal of Computational Chemistry, 35 (28). pp. 2040-2046. ISSN 0192-8651

Dehzangi, A. and Paliwal, K.K. and Lyons, J. and Sharma, Alokanand and Sattar, A. (2014) Proposing a highly accurate protein structural class predictor using segmentation - based features. BMC Genomics, 15 (1). pp. 1-13. ISSN 1471-2164

Dehzangi, A. and Paliwal, K.K. and Sharma, Alokanand and Dehzangi, O. and Sattar, A. (2013) A combination of feature extraction methods with an ensemble of different classifiers for protein structural class prediction problem. IEEE/ACM Transactions on Computational Biology and Bioinformatics, N/A . p. 1. ISSN 1557-9964

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