Items where Author is "Sharma, Ronesh"

Book Chapter

Elisha, Dannerick and Sanau, Jimson and Assaf, Mansour and Kumar, Rahul R. and Sharma, Bibhya N. and Sharma, Ronesh (2023) Molecular Recognition and Feature Extraction System. In: Proceedings of International Conference on Paradigms of Communication, Computing and Data Analytics. Springer Nature, Singapore. ISBN 978-981-99-4625-9

Lopez, Yosvany and Kamola, P.J. and Sharma, Ronesh and Shigemizu, Daichi and Tsunoda, Tatsuhiko and Sharma, Alokanand (2018) Computational pipelines and workflows in bioinformatics. In: Encyclopaedia of Bioinformatics and Computational Biology. Elsevier, Oxford, pp. 113-134. ISBN 9780128114148

Conference Proceedings

Kumar, Shiu and Sharma, Ronesh and Sharma, Alokanand and Tsunoda, T. (2016) Decimation Filter with Common Spatial Pattern and Fishers Discriminant Analysis for Motor Imagery Classification. [Conference Proceedings]

Sharma, Alokanand and Sharma, Ronesh and Dehzangi, A. and Lyons, J. and Paliwal, K.K. and Tsunoda, T. (2015) Importance of Dimensionality Reduction in Protein Fold Recognition. [Conference Proceedings]

Journal Article

Sharma, Alokanand and Lysenko, Artem and Lopez, Yosvany and Dehzangi, Abdollah and Sharma, Ronesh and Reddy, Hamendra M. and Sattar, Abdul and Tsunoda, Tatsuhiko (2019) HseSUMO: Sumoylation site prediction using half - sphere exposures of amino acids residues. BMC Genomics, 19 (9). pp. 1-7. ISSN 1471-2164

Sharma, Ronesh and Sharma, Alokanand and Patil, Ashwini and Tsunoda, Tatsuhiko (2019) Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions. BMC Bioinformatics, 19 (13). pp. 155-163. ISSN 1471-2105

Sharma, Ronesh and Sharma, Alokanand and Raicar, Gaurav and Tsunoda, Tatsuhiko and Patil, Ashwini (2018) Opal+: length - specific MoRF prediction in intrinsically disordered protein sequences. Proteomics, 180005 . pp. 1-4. ISSN 1615-9853

Fourati, Slim and Talla, Aarthi and Mahmoudian, Mehrad and Burkhart, Joshua G. and Klén, Riku and Henao, Ricardo and Yu, Thomas and Aydın, Zafer and Yeung, Ka Y. and Ahsen, Mehmet E. and Almugbel, Reem and Jahandideh, Samad and Liang, Xiao and Nordling, Torbjörn E.M. and Shiga, Motoki and Stanescu, Ana and Vogel, Robert and Pandey, Gaurav and Chiu, Christopher and McClain, Micah T. and Woods, Christopher W. and Ginsburg, Geoffrey S. and Elo, Laura L. and Tsalik, Ephraim L. and Mangravite, Lara M. and Sieberts, Solveig K. and Abdallah, Emna B. and Aghababazadeh, Farnoosh A. and Amadoz, Alicia and Bhalla, Sherry and Bleakley, Kevin and Bongen, Erika and Borzacchielo, Domenico and Bucher, Philipp and Carbonell-Caballero, Jose and Chaudhary, Kumardeep and Chinesta, Francisco and Chodavarapu, Prasad and Chow, Ryan D. and Cokelaer, Thomas and Cubuk, Cankut and Dhanda, Sandeep K. and Dopazo, Joaquin and Faux, Thomas and Feng, Yang and Flinta, Christofer and Guziolowski, Carito and He, Di and Hidalgo, Marta R. and Hou, Jiayi and Inoue, Katsumi and Jaakkola, Maria K. and Ji, Jiadong and Kumar, Ritesh and Kumar, Sunil and Kursa, Miron B. and Li, Qian and Lu, Pengcheng and Magnin, Morgan and Mao, Weiguang and Miannay, Bertrand and Nikolayeva, Iryna and Obradovic, Zoran and Pak, Chi and Rahman, Mohammad M. and Razzaq, Misbah and Ribeiro, Tony and Roux, Olivier and Saghapour, Ehsan and Saini, Harsh and Sarhadi, Shamim and Sato, Hiroki and Schwikowski, Benno and Sharma, Alokanand and Sharma, Ronesh and Singla, Deepak and Stojkovic, Ivan and Suomi, Tomi and Suprun, Maria and Tian, Chengzhe and Tomalin, Lewis E. and Xie, Lei and Yu, Xiang and Łopuszyński, Michał (2018) A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection. Nature Communications, 9 (1). NA. ISSN 2041-1723

Sharma, Ronesh and Bayarjargal, M. and Tsunoda, T. and Patil, A. and Sharma, Alokanand (2018) MoRFPred-plus: Computational Identification of MoRFs in Protein Sequence using physicochemical properties and HMM profiles. Journal of Theoretical Biology, 437 . pp. 9-16. ISSN 0022-5193

Sharma, Ronesh and Raicar, Gaurav and Tsunoda, Tsunoda and Patil, A. and Sharma, Alokanand (2018) OPAL: prediction of MoRF regions in intrinsically disordered protein sequence. Bioinformatics, 34 (11). pp. 1850-1858. ISSN 1367-4803

Sharma, Ronesh and Kumar, Shiu and Tsunoda, T. and Patil, A and Sharma, Alokanand (2016) Predicting MoRFs in protein sequences using HMM profiles. BMC Bioinformatics, 17 (19). pp. 504-512. ISSN 1471-2105

Sharma, Ronesh and Dehzangi, A. and Lyons, J. and Paliwal, K.K. and Tsunoda, T. and Sharma, Alokanand (2015) Predict gram - positive and gram - negative subcellular localization via incorporating evolutionary information and physicochemical features into Chou’s general PseAAC. IEEE Transactions on NanoBioscience, 14 (8). pp. 915-926. ISSN 1536-1241

Professional and Technical Reports

Sharma, Ronesh and Sharma, Alokanand and Raicar, Gaurav and Tsunoda, Tatsuhiko and Patil, A. (2019) Supplementary material for Opal+: length-specific MoRF prediction in intrinsically disordered protein sequences. [Professional and Technical Reports]